Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 AC004832.2-201ENST00000426397 482 ntBASIC13.49□□□□□ -0.25
CPNE2Q96FN4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 KRT8P48-201ENST00000515599 1220 ntBASIC13.49□□□□□ -0.25
CPNE2Q96FN4 KRT18P58-201ENST00000527480 1120 ntBASIC13.49□□□□□ -0.25
CPNE2Q96FN4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.49□□□□□ -0.25
CPNE2Q96FN4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CPNE2Q96FN4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 AL035456.1-201ENST00000456064 1369 ntBASIC13.48□□□□□ -0.25
CPNE2Q96FN4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 AC023274.1-201ENST00000418278 595 ntBASIC13.48□□□□□ -0.25
CPNE2Q96FN4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 FDX1P1-201ENST00000449115 551 ntBASIC13.48□□□□□ -0.25
CPNE2Q96FN4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 SLC25A1P1-201ENST00000528351 927 ntBASIC13.48□□□□□ -0.25
CPNE2Q96FN4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CPNE2Q96FN4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPNE2Q96FN4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CPNE2Q96FN4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms