Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm11511-201ENSMUST00000118146 540 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm7848-201ENSMUST00000210739 718 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm5455-201ENSMUST00000058710 715 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.2□□□□□ -0.3
TraipQ8VIG6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TraipQ8VIG6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm22885-201ENSMUST00000157410 107 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 Rprl1-201ENSMUST00000158050 327 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm18165-201ENSMUST00000217426 928 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.19□□□□□ -0.3
TraipQ8VIG6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TraipQ8VIG6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TraipQ8VIG6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TraipQ8VIG6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms