Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 AC025181.2-201ENST00000606994 802 ntBASIC13.54□□□□□ -0.24
CPEB3Q8NE35 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 AC008761.3-201ENST00000624803 892 ntBASIC13.54□□□□□ -0.24
CPEB3Q8NE35 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 DBET-201ENST00000630918 3363 ntBASIC13.53□□□□□ -0.24
CPEB3Q8NE35 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MEP1AP4-201ENST00000423244 1087 ntBASIC13.53□□□□□ -0.24
CPEB3Q8NE35 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 RN7SL399P-201ENST00000471648 279 ntBASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AC093004.1-201ENST00000508850 424 ntBASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AC004233.3-201ENST00000607794 1269 ntBASIC13.53□□□□□ -0.24
CPEB3Q8NE35 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPEB3Q8NE35 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CPEB3Q8NE35 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 AC027307.3-201ENST00000594262 1100 ntBASIC13.52□□□□□ -0.25
CPEB3Q8NE35 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.52□□□□□ -0.25
CPEB3Q8NE35 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms