Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 AL139094.1-201ENST00000405549 1188 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 IMP3P2-201ENST00000489760 475 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 MIR3619-201ENST00000579667 83 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 AC097724.1-201ENST00000609581 426 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 AC138649.2-201ENST00000615886 705 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 AC022188.1-201ENST00000620960 1664 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 PRAL-201ENST00000624952 3286 ntBASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
TMEFF1Q8IYR6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 MIR769-201ENST00000390225 118 ntBASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AC016700.1-201ENST00000429424 312 ntBASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AC245884.6-201ENST00000515672 1067 ntBASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 OR10B1P-201ENST00000601666 907 ntBASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 AL158070.2-201ENST00000623713 1621 ntBASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TMEFF1Q8IYR6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEFF1Q8IYR6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms