Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 KRT43P-201ENST00000434019 910 ntBASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 GPR53P-205ENST00000457298 1084 ntBASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AL022328.1-201ENST00000610050 478 ntBASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AC063926.3-201ENST00000624734 5658 ntBASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 AC018665.1-201ENST00000622927 1362 ntBASIC15.11■□□□□ 0.01
LRRTM4Q86VH4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 C18orf15-201ENST00000623680 2534 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC104457.1-201ENST00000401024 814 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 GHSR-202ENST00000427970 912 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AP001889.1-201ENST00000525414 633 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 KRT17P8-201ENST00000540749 863 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AC112693.3-201ENST00000624819 1983 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 AL158070.2-201ENST00000623713 1621 ntBASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM4Q86VH4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 MSTO2P-201ENST00000314835 1709 ntBASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 RNU1-114P-201ENST00000365297 166 ntBASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 AC114812.1-204ENST00000449669 728 ntBASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms