Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 BNIP3P29-201ENST00000598302 571 ntBASIC13.27□□□□□ -0.29
CD40P25942 AC011447.5-201ENST00000616168 564 ntBASIC13.27□□□□□ -0.29
CD40P25942 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 AL158070.2-201ENST00000623713 1621 ntBASIC13.27□□□□□ -0.29
CD40P25942 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CD40P25942 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40P25942 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40P25942 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40P25942 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40P25942 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CD40P25942 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40P25942 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 AC099336.1-201ENST00000417053 1171 ntBASIC13.26□□□□□ -0.29
CD40P25942 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 HLA-V-201ENST00000429037 534 ntBASIC13.26□□□□□ -0.29
CD40P25942 CSF2RBP1-201ENST00000447905 391 ntBASIC13.26□□□□□ -0.29
CD40P25942 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40P25942 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CD40P25942 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.26□□□□□ -0.29
CD40P25942 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40P25942 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40P25942 AC090616.6-203ENST00000579186 1945 ntBASIC13.26□□□□□ -0.29
CD40P25942 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 RHOXF1P1-202ENST00000635473 501 ntBASIC13.26□□□□□ -0.29
CD40P25942 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40P25942 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40P25942 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40P25942 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40P25942 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40P25942 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40P25942 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 AC148477.4-201ENST00000613430 1793 ntBASIC13.25□□□□□ -0.29
CD40P25942 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CD40P25942 AL138709.1-201ENST00000614840 1693 ntBASIC13.25□□□□□ -0.29
CD40P25942 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40P25942 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 LRRC59-203ENST00000576448 1531 ntBASIC13.25□□□□□ -0.29
CD40P25942 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40P25942 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 AL139094.1-201ENST00000405549 1188 ntBASIC13.25□□□□□ -0.29
CD40P25942 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.25□□□□□ -0.29
CD40P25942 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40P25942 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms