Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
APOC1P02654 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOC1P02654 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC1P02654 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC1P02654 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC1P02654 AL512356.2-201ENST00000546955 174 ntBASIC13.73□□□□□ -0.21
APOC1P02654 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC1P02654 AC093520.2-201ENST00000561830 333 ntBASIC13.73□□□□□ -0.21
APOC1P02654 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 AL607033.1-201ENST00000623900 1599 ntBASIC13.73□□□□□ -0.21
APOC1P02654 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 CETN4P-206ENST00000642099 2168 ntBASIC13.73□□□□□ -0.21
APOC1P02654 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 C18orf15-201ENST00000623680 2534 ntBASIC13.72□□□□□ -0.21
APOC1P02654 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.72□□□□□ -0.21
APOC1P02654 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 AC107918.4-201ENST00000641966 3141 ntBASIC13.72□□□□□ -0.21
APOC1P02654 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.72□□□□□ -0.21
APOC1P02654 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 GPS2P2-201ENST00000430745 888 ntBASIC13.72□□□□□ -0.21
APOC1P02654 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.72□□□□□ -0.21
APOC1P02654 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOC1P02654 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 BANF1P1-201ENST00000553684 263 ntBASIC13.72□□□□□ -0.21
APOC1P02654 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 AL133215.2-201ENST00000609242 977 ntBASIC13.72□□□□□ -0.21
APOC1P02654 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC1P02654 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
APOC1P02654 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.72□□□□□ -0.21
APOC1P02654 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC1P02654 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC1P02654 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms