Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 RPL17P45-201ENST00000586289 509 ntBASIC17.3■□□□□ 0.36
ALDH1A1P00352 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 AL161773.1-201ENST00000624845 863 ntBASIC17.29■□□□□ 0.36
ALDH1A1P00352 AC012183.1-201ENST00000625197 499 ntBASIC17.29■□□□□ 0.36
ALDH1A1P00352 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ALDH1A1P00352 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALDH1A1P00352 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 Z69890.1-201ENST00000382990 339 ntBASIC17.28■□□□□ 0.36
ALDH1A1P00352 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 KLF2P1-201ENST00000447438 1042 ntBASIC17.28■□□□□ 0.36
ALDH1A1P00352 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 AP000358.1-201ENST00000456260 156 ntBASIC17.28■□□□□ 0.36
ALDH1A1P00352 RPL18AP3-201ENST00000462885 528 ntBASIC17.28■□□□□ 0.36
ALDH1A1P00352 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 AC093752.3-201ENST00000567343 901 ntBASIC17.28■□□□□ 0.36
ALDH1A1P00352 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms