Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 DFFBP1-201ENST00000433250 979 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 AL353779.1-201ENST00000434793 351 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 RPL13P2-201ENST00000440687 659 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 AL589987.1-201ENST00000453380 819 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.46□□□□□ -0.09
TRIM3O75382 AC093004.1-201ENST00000508850 424 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM3O75382 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 TIMM17BP1-201ENST00000545713 516 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM3O75382 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM3O75382 AC097359.3-201ENST00000603982 1210 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 LINC01115-203ENST00000606068 577 ntBASIC14.46□□□□□ -0.09
TRIM3O75382 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM3O75382 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRIM3O75382 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM3O75382 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
TRIM3O75382 AP003680.1-201ENST00000598970 3660 ntBASIC14.46□□□□□ -0.1
TRIM3O75382 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM3O75382 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM3O75382 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM3O75382 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM3O75382 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRIM3O75382 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM3O75382 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 AC015922.1-201ENST00000421102 1152 ntBASIC14.45□□□□□ -0.1
TRIM3O75382 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM3O75382 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 API5-211ENST00000534695 560 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM3O75382 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TRIM3O75382 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRIM3O75382 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.45□□□□□ -0.1
TRIM3O75382 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 AL662799.1-202ENST00000614205 422 ntBASIC14.45□□□□□ -0.1
TRIM3O75382 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM3O75382 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM3O75382 AL391825.1-201ENST00000457671 1364 ntBASIC14.45□□□□□ -0.1
TRIM3O75382 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.45□□□□□ -0.1
TRIM3O75382 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRIM3O75382 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRIM3O75382 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms