Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRRM3A6NNA2 AC007686.3-201ENST00000619017 3487 ntBASIC16.06■□□□□ 0.16
SRRM3A6NNA2 AC092135.3-201ENST00000624151 1846 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC027601.5-201ENST00000624065 2482 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AP001282.1-201ENST00000531301 1499 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AP006294.1-201ENST00000415407 339 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC104794.3-201ENST00000566840 1248 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 MIR6787-201ENST00000616675 61 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AL645728.2-201ENST00000641974 660 ntBASIC16.05■□□□□ 0.16
SRRM3A6NNA2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SRRM3A6NNA2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AC023024.2-201ENST00000623561 1993 ntBASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AL928921.2-201ENST00000641325 2442 ntBASIC16.04■□□□□ 0.16
SRRM3A6NNA2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 DGCR5-201ENST00000399539 862 ntBASIC16.04■□□□□ 0.16
SRRM3A6NNA2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.04■□□□□ 0.16
SRRM3A6NNA2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AL161645.1-201ENST00000622716 1255 ntBASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SRRM3A6NNA2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms