Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 AC022616.1-201ENST00000518688 554 ntBASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHROOM1Q2M3G4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 FNTAP2-201ENST00000430308 634 ntBASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 MIR4683-201ENST00000579659 81 ntBASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 RN7SL713P-201ENST00000582127 302 ntBASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 REXO1L4P-201ENST00000605109 1937 ntBASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.84■□□□□ 0.45
SHROOM1Q2M3G4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHROOM1Q2M3G4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.83■□□□□ 0.45
SHROOM1Q2M3G4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SHROOM1Q2M3G4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.83■□□□□ 0.45
SHROOM1Q2M3G4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 DUX4L47-201ENST00000566374 394 ntBASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 AL645728.2-202ENST00000641679 227 ntBASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 AC132872.4-202ENST00000622924 2756 ntBASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 AC009093.2-202ENST00000620513 2079 ntBASIC17.83■□□□□ 0.44
SHROOM1Q2M3G4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AL360270.3-201ENST00000609118 1348 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 CALR4P-201ENST00000431943 946 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 CHMP1AP1-201ENST00000445563 662 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AC100850.1-201ENST00000506768 649 ntBASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.82■□□□□ 0.44
SHROOM1Q2M3G4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms