Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
WNT3AP56704 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
WNT3AP56704 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
WNT3AP56704 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
WNT3AP56704 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
WNT3AP56704 DRD5P1-201ENST00000456605 1438 ntBASIC15.6■□□□□ 0.09
WNT3AP56704 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
WNT3AP56704 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.59■□□□□ 0.09
WNT3AP56704 AP000845.1-201ENST00000581677 2131 ntBASIC15.59■□□□□ 0.09
WNT3AP56704 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 LINC00528-201ENST00000600723 2160 ntBASIC15.59■□□□□ 0.09
WNT3AP56704 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.59■□□□□ 0.09
WNT3AP56704 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 DFFBP1-201ENST00000433250 979 ntBASIC15.59■□□□□ 0.09
WNT3AP56704 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 VDAC1P7-201ENST00000462417 847 ntBASIC15.59■□□□□ 0.09
WNT3AP56704 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.59■□□□□ 0.09
WNT3AP56704 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.59■□□□□ 0.09
WNT3AP56704 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
WNT3AP56704 AC004233.3-201ENST00000607794 1269 ntBASIC15.59■□□□□ 0.09
WNT3AP56704 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.59■□□□□ 0.09
WNT3AP56704 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
WNT3AP56704 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.59■□□□□ 0.09
WNT3AP56704 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
WNT3AP56704 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 REXO1L4P-201ENST00000605109 1937 ntBASIC15.58■□□□□ 0.09
WNT3AP56704 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.58■□□□□ 0.09
WNT3AP56704 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
WNT3AP56704 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.58■□□□□ 0.09
WNT3AP56704 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.58■□□□□ 0.09
WNT3AP56704 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
WNT3AP56704 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.58■□□□□ 0.08
WNT3AP56704 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
WNT3AP56704 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3AP56704 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
WNT3AP56704 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3AP56704 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3AP56704 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
WNT3AP56704 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.58■□□□□ 0.08
WNT3AP56704 AC026410.3-201ENST00000514280 936 ntBASIC15.58■□□□□ 0.08
WNT3AP56704 SAMD11P1-201ENST00000571429 661 ntBASIC15.58■□□□□ 0.08
WNT3AP56704 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.58■□□□□ 0.08
WNT3AP56704 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.58■□□□□ 0.08
WNT3AP56704 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3AP56704 AL132655.2-201ENST00000596276 594 ntBASIC15.58■□□□□ 0.08
WNT3AP56704 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms