Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 AL450487.1-201ENST00000426799 995 ntBASIC12.79□□□□□ -0.36
SNCAP37840 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.79□□□□□ -0.36
SNCAP37840 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 AC134407.2-201ENST00000625089 1978 ntBASIC12.79□□□□□ -0.36
SNCAP37840 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 AC002056.1-201ENST00000395613 760 ntBASIC12.78□□□□□ -0.36
SNCAP37840 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.78□□□□□ -0.36
SNCAP37840 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.78□□□□□ -0.36
SNCAP37840 IGHV3-22-201ENST00000520721 359 ntBASIC12.78□□□□□ -0.36
SNCAP37840 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.78□□□□□ -0.36
SNCAP37840 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 AC243562.2-201ENST00000561247 970 ntBASIC12.78□□□□□ -0.36
SNCAP37840 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.78□□□□□ -0.36
SNCAP37840 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.78□□□□□ -0.36
SNCAP37840 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.78□□□□□ -0.36
SNCAP37840 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 AL122018.1-201ENST00000446607 2310 ntBASIC12.78□□□□□ -0.36
SNCAP37840 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.78□□□□□ -0.36
SNCAP37840 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
SNCAP37840 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms