Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.03■□□□□ -0
LDLRP01130 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.03■□□□□ -0
LDLRP01130 GPR53P-205ENST00000457298 1084 ntBASIC15.03■□□□□ -0
LDLRP01130 IGHV3-71-201ENST00000523324 359 ntBASIC15.03■□□□□ -0
LDLRP01130 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.03■□□□□ -0
LDLRP01130 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.03■□□□□ -0
LDLRP01130 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.03■□□□□ -0
LDLRP01130 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.03■□□□□ -0
LDLRP01130 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.03■□□□□ -0
LDLRP01130 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.03■□□□□ -0
LDLRP01130 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.03■□□□□ -0
LDLRP01130 AC021097.1-201ENST00000607902 574 ntBASIC15.03■□□□□ -0
LDLRP01130 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.03■□□□□ -0
LDLRP01130 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.03■□□□□ -0
LDLRP01130 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.03■□□□□ -0
LDLRP01130 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.03■□□□□ -0
LDLRP01130 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.03■□□□□ -0
LDLRP01130 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LDLRP01130 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.03■□□□□ -0
LDLRP01130 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LDLRP01130 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LDLRP01130 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDLRP01130 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LDLRP01130 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LDLRP01130 AC012569.1-201ENST00000591191 1524 ntBASIC15.02■□□□□ -0
LDLRP01130 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LDLRP01130 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.02■□□□□ -0
LDLRP01130 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.02■□□□□ -0
LDLRP01130 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.02■□□□□ -0
LDLRP01130 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
LDLRP01130 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LDLRP01130 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LDLRP01130 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.02■□□□□ -0
LDLRP01130 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.02■□□□□ -0
LDLRP01130 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.02■□□□□ -0
LDLRP01130 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.02■□□□□ -0
LDLRP01130 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LDLRP01130 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.02■□□□□ -0
LDLRP01130 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.02■□□□□ -0
LDLRP01130 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.02■□□□□ -0
LDLRP01130 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
LDLRP01130 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LDLRP01130 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LDLRP01130 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.02□□□□□ -0.01
LDLRP01130 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LDLRP01130 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.02□□□□□ -0.01
LDLRP01130 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.02□□□□□ -0.01
LDLRP01130 AC126365.1-201ENST00000578585 1514 ntBASIC15.02□□□□□ -0.01
LDLRP01130 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LDLRP01130 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LDLRP01130 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LDLRP01130 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LDLRP01130 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.01□□□□□ -0.01
LDLRP01130 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.01□□□□□ -0.01
LDLRP01130 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 KRT8P44-201ENST00000441609 1350 ntBASIC15.01□□□□□ -0.01
LDLRP01130 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LDLRP01130 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.01□□□□□ -0.01
LDLRP01130 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LDLRP01130 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms