Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 RPL5P21-201ENST00000404620 815 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 AC097065.1-201ENST00000425737 517 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 AC130709.1-201ENST00000484779 1212 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.4■□□□□ 0.22
TIMP1P01033 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.4■□□□□ 0.22
TIMP1P01033 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.4■□□□□ 0.22
TIMP1P01033 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.4■□□□□ 0.22
TIMP1P01033 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.4■□□□□ 0.22
TIMP1P01033 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TIMP1P01033 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.4■□□□□ 0.22
TIMP1P01033 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.4■□□□□ 0.22
TIMP1P01033 AC009884.2-201ENST00000603110 324 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
TIMP1P01033 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.4■□□□□ 0.22
TIMP1P01033 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.4■□□□□ 0.22
TIMP1P01033 OR6D1P-203ENST00000641209 4860 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TIMP1P01033 AL360270.3-201ENST00000609118 1348 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 AC011840.2-201ENST00000563063 1520 ntBASIC16.4■□□□□ 0.22
TIMP1P01033 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TIMP1P01033 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TIMP1P01033 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.39■□□□□ 0.22
TIMP1P01033 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.39■□□□□ 0.22
TIMP1P01033 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.22
TIMP1P01033 CAP2P1-201ENST00000557743 1390 ntBASIC16.39■□□□□ 0.21
TIMP1P01033 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.39■□□□□ 0.21
TIMP1P01033 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TIMP1P01033 AL592076.1-201ENST00000424448 303 ntBASIC16.39■□□□□ 0.21
TIMP1P01033 AC078875.1-201ENST00000431907 724 ntBASIC16.39■□□□□ 0.21
TIMP1P01033 AC026320.2-201ENST00000434379 478 ntBASIC16.39■□□□□ 0.21
TIMP1P01033 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.39■□□□□ 0.21
TIMP1P01033 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TIMP1P01033 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TIMP1P01033 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.38■□□□□ 0.21
TIMP1P01033 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TIMP1P01033 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 AC020910.5-201ENST00000623668 1865 ntBASIC16.38■□□□□ 0.21
TIMP1P01033 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.38■□□□□ 0.21
TIMP1P01033 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TIMP1P01033 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TIMP1P01033 RPL8P2-201ENST00000430538 502 ntBASIC16.38■□□□□ 0.21
TIMP1P01033 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.38■□□□□ 0.21
TIMP1P01033 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TIMP1P01033 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.38■□□□□ 0.21
TIMP1P01033 AC005962.1-201ENST00000584100 773 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms