Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC011477.6-201ENST00000604980 1927 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 ANKRD66-202ENST00000565422 1346 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 TFAM-201ENST00000373895 973 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.06■□□□□ 0.32
PITPNM1O00562 ACTBP8-201ENST00000403258 1108 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC092647.3-201ENST00000443044 633 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 IGHJ2P-201ENST00000454480 60 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PITPNM1O00562 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 SCARNA20.5-201ENST00000516991 142 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC17.06■□□□□ 0.32
PITPNM1O00562 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC17.06■□□□□ 0.32
PITPNM1O00562 SNORA59B-202ENST00000578183 701 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.06■□□□□ 0.32
PITPNM1O00562 AC026741.1-201ENST00000605892 482 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 PTMAP5-202ENST00000607242 1162 ntBASIC17.06■□□□□ 0.32
PITPNM1O00562 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.06■□□□□ 0.32
PITPNM1O00562 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.06■□□□□ 0.32
PITPNM1O00562 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PITPNM1O00562 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PITPNM1O00562 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PITPNM1O00562 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PITPNM1O00562 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 FBXL21-201ENST00000297158 1305 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PITPNM1O00562 MIR1202-201ENST00000408529 83 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC17.05■□□□□ 0.32
PITPNM1O00562 RPP40P1-201ENST00000426762 456 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC17.05■□□□□ 0.32
PITPNM1O00562 RPSAP36-202ENST00000494591 1261 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AC119751.4-201ENST00000507498 357 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 AP000350.5-201ENST00000609825 613 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AL050303.3-201ENST00000613704 284 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AC140725.3-201ENST00000616193 880 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC17.05■□□□□ 0.32
PITPNM1O00562 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.05■□□□□ 0.32
PITPNM1O00562 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 AC018892.3-201ENST00000623986 2499 ntBASIC17.05■□□□□ 0.32
PITPNM1O00562 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.05■□□□□ 0.32
PITPNM1O00562 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PITPNM1O00562 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PITPNM1O00562 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PITPNM1O00562 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PITPNM1O00562 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PITPNM1O00562 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PITPNM1O00562 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PITPNM1O00562 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PITPNM1O00562 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PITPNM1O00562 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.04■□□□□ 0.32
PITPNM1O00562 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PITPNM1O00562 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PITPNM1O00562 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PITPNM1O00562 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms