Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.88■□□□□ 0.77
ABCA3Q99758 AC007326.1-201ENST00000604539 458 ntBASIC19.88■□□□□ 0.77
ABCA3Q99758 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCA3Q99758 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ABCA3Q99758 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCA3Q99758 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCA3Q99758 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.88■□□□□ 0.77
ABCA3Q99758 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA3Q99758 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA3Q99758 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCA3Q99758 AC114947.1-202ENST00000514136 344 ntBASIC19.88■□□□□ 0.77
ABCA3Q99758 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCA3Q99758 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.88■□□□□ 0.77
ABCA3Q99758 AC011247.3-201ENST00000603297 438 ntBASIC19.88■□□□□ 0.77
ABCA3Q99758 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.88■□□□□ 0.77
ABCA3Q99758 MIR6769A-201ENST00000617340 73 ntBASIC19.88■□□□□ 0.77
ABCA3Q99758 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 TMBIM7P-202ENST00000641474 1516 ntBASIC19.87■□□□□ 0.77
ABCA3Q99758 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ABCA3Q99758 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 MARK2P16-201ENST00000605714 1723 ntBASIC19.87■□□□□ 0.77
ABCA3Q99758 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.87■□□□□ 0.77
ABCA3Q99758 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.87■□□□□ 0.77
ABCA3Q99758 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ABCA3Q99758 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 PGAM1P12-201ENST00000505622 748 ntBASIC19.87■□□□□ 0.77
ABCA3Q99758 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCA3Q99758 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.87■□□□□ 0.77
ABCA3Q99758 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.87■□□□□ 0.77
ABCA3Q99758 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.87■□□□□ 0.77
ABCA3Q99758 AC006158.1-201ENST00000610661 249 ntBASIC19.87■□□□□ 0.77
ABCA3Q99758 AC073592.2-201ENST00000623062 780 ntBASIC19.87■□□□□ 0.77
ABCA3Q99758 AC023090.2-201ENST00000625182 2110 ntBASIC19.87■□□□□ 0.77
ABCA3Q99758 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ABCA3Q99758 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.86■□□□□ 0.77
ABCA3Q99758 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA3Q99758 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA3Q99758 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA3Q99758 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ABCA3Q99758 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA3Q99758 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA3Q99758 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.86■□□□□ 0.77
ABCA3Q99758 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCA3Q99758 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCA3Q99758 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.86■□□□□ 0.77
ABCA3Q99758 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.86■□□□□ 0.77
ABCA3Q99758 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
ABCA3Q99758 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.86■□□□□ 0.77
ABCA3Q99758 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.86■□□□□ 0.77
ABCA3Q99758 AC027139.1-201ENST00000565286 951 ntBASIC19.86■□□□□ 0.77
ABCA3Q99758 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
ABCA3Q99758 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.86■□□□□ 0.77
ABCA3Q99758 AP003392.6-201ENST00000607709 325 ntBASIC19.86■□□□□ 0.77
ABCA3Q99758 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCA3Q99758 AC092127.1-201ENST00000567093 3455 ntBASIC19.86■□□□□ 0.77
ABCA3Q99758 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCA3Q99758 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCA3Q99758 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.86■□□□□ 0.77
ABCA3Q99758 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.85■□□□□ 0.77
ABCA3Q99758 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.85■□□□□ 0.77
ABCA3Q99758 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.85■□□□□ 0.77
ABCA3Q99758 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.85■□□□□ 0.77
ABCA3Q99758 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.85■□□□□ 0.77
ABCA3Q99758 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ABCA3Q99758 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA3Q99758 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA3Q99758 HCG27-204ENST00000424675 895 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms