Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 AL138709.1-201ENST00000614840 1693 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.6■□□□□ 0.25
SNX27Q96L92 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX27Q96L92 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 AL139094.1-201ENST00000405549 1188 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX27Q96L92 AL355994.2-201ENST00000447882 704 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 RPS2P36-201ENST00000456516 831 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
SNX27Q96L92 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX27Q96L92 AC025279.2-201ENST00000569730 653 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 SPCS2P2-201ENST00000603270 608 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 AC145423.3-201ENST00000615987 467 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SNX27Q96L92 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNX27Q96L92 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX27Q96L92 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 AC087481.3-201ENST00000602886 1894 ntBASIC16.6■□□□□ 0.25
SNX27Q96L92 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX27Q96L92 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
SNX27Q96L92 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX27Q96L92 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX27Q96L92 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX27Q96L92 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX27Q96L92 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX27Q96L92 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX27Q96L92 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 C8orf49-201ENST00000525043 1968 ntBASIC16.59■□□□□ 0.25
SNX27Q96L92 CICP11-201ENST00000434745 2827 ntBASIC16.59■□□□□ 0.25
SNX27Q96L92 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.59■□□□□ 0.25
SNX27Q96L92 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 GHSR-202ENST00000427970 912 ntBASIC16.59■□□□□ 0.25
SNX27Q96L92 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.59■□□□□ 0.25
SNX27Q96L92 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SNX27Q96L92 IGHJ2P-201ENST00000454480 60 ntBASIC16.59■□□□□ 0.25
SNX27Q96L92 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.59■□□□□ 0.25
SNX27Q96L92 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.59■□□□□ 0.25
SNX27Q96L92 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX27Q96L92 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 KRT8P14-201ENST00000414254 1442 ntBASIC16.59■□□□□ 0.25
SNX27Q96L92 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX27Q96L92 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNX27Q96L92 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX27Q96L92 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms