Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 HAUS4P1-201ENST00000406739 1145 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 HLA-V-201ENST00000429037 534 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 AL162726.2-201ENST00000438986 1017 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 AC008735.3-201ENST00000596646 500 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 AC133539.2-201ENST00000604757 467 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 AL512343.1-201ENST00000605837 169 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 OR2I1P-210ENST00000642037 4691 ntBASIC16.35■□□□□ 0.21
ATP2A3Q93084 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2A3Q93084 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATP2A3Q93084 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.34■□□□□ 0.21
ATP2A3Q93084 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 RPS2P32-201ENST00000439199 892 ntBASIC16.34■□□□□ 0.21
ATP2A3Q93084 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 AC022210.1-201ENST00000449856 793 ntBASIC16.34■□□□□ 0.21
ATP2A3Q93084 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 AC010319.3-201ENST00000597028 470 ntBASIC16.34■□□□□ 0.21
ATP2A3Q93084 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATP2A3Q93084 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.34■□□□□ 0.21
ATP2A3Q93084 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP2A3Q93084 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP2A3Q93084 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
ATP2A3Q93084 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP2A3Q93084 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP2A3Q93084 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP2A3Q93084 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATP2A3Q93084 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ATP2A3Q93084 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP2A3Q93084 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 BOLA2P3-201ENST00000404566 256 ntBASIC16.33■□□□□ 0.2
ATP2A3Q93084 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 AC074338.1-201ENST00000416825 156 ntBASIC16.33■□□□□ 0.2
ATP2A3Q93084 KRT43P-201ENST00000434019 910 ntBASIC16.33■□□□□ 0.2
ATP2A3Q93084 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.33■□□□□ 0.2
ATP2A3Q93084 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms