Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Gm7600-201ENSMUST00000209657 785 ntBASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga6Q91XY2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm11667-201ENSMUST00000119828 486 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm17812-201ENSMUST00000204935 318 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm45224-201ENSMUST00000208203 414 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Ntng1-201ENSMUST00000051253 327 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga6Q91XY2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga6Q91XY2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms