Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 CTBP2P8-201ENST00000422584 1330 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC026470.1-201ENST00000478038 846 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ORAOV1P1-201ENST00000503108 395 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 GOLGA2P7-209ENST00000560408 745 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC008825.2-201ENST00000603374 718 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AL109809.1-201ENST00000418979 1367 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 LINC01783-202ENST00000614408 828 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 BX284668.2-205ENST00000619677 828 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 DUTP3-201ENST00000450025 415 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AP003398.1-201ENST00000531124 318 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AC092364.2-201ENST00000596710 2692 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AC108734.2-201ENST00000420887 1069 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AC093752.3-201ENST00000567343 901 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 MIR2392-201ENST00000584881 84 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 AC087392.5-201ENST00000612517 489 ntBASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ALMS1Q8TCU4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 KRT18P36-201ENST00000411618 1276 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AC093826.1-201ENST00000508655 993 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AL360270.3-201ENST00000609118 1348 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AC244197.1-201ENST00000456494 951 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AREG-202ENST00000502307 956 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms