Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ENPP7P14-201ENST00000621765 1040 ntBASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 AC010491.1-201ENST00000563101 2797 ntBASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEFF1Q8IYR6 CYP2T1P-202ENST00000641596 2535 ntBASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 FAM8A4P-201ENST00000435433 1213 ntBASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 AC007663.3-201ENST00000609632 465 ntBASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 MTHFR-217ENST00000641820 1569 ntBASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEFF1Q8IYR6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 TNRC18P3-201ENST00000441896 2691 ntBASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 COX5BP1-201ENST00000507622 393 ntBASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms