Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm28324-201ENSMUST00000187913 264 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Gm45398-201ENSMUST00000210561 165 ntBASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a6Q8C6K9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Mir874-201ENSMUST00000104769 76 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm23771-201ENSMUST00000178702 110 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm16166-201ENSMUST00000118291 787 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm19287-201ENSMUST00000203190 358 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gm3793-201ENSMUST00000204973 672 ntBASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a6Q8C6K9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a6Q8C6K9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Gm13047-201ENSMUST00000117116 815 ntBASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Gm13263-201ENSMUST00000121271 838 ntBASIC11.14□□□□□ -0.63
Col6a6Q8C6K9 Gm4726-201ENSMUST00000135604 736 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms