Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 AC008738.7-201ENST00000609744 511 ntBASIC12.82□□□□□ -0.36
TREML4Q6UXN2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.82□□□□□ -0.36
TREML4Q6UXN2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AL009178.2-201ENST00000597278 2719 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AP001981.1-201ENST00000531132 738 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC021097.1-201ENST00000607902 574 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC013470.4-201ENST00000619978 986 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 AC087499.5-201ENST00000452760 1342 ntBASIC12.81□□□□□ -0.36
TREML4Q6UXN2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TREML4Q6UXN2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 AC090616.6-203ENST00000579186 1945 ntBASIC12.8□□□□□ -0.36
TREML4Q6UXN2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TREML4Q6UXN2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms