Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFBP49765 AC105020.1-201ENST00000435356 2205 ntBASIC17.29■□□□□ 0.36
VEGFBP49765 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VEGFBP49765 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VEGFBP49765 MARK2P16-201ENST00000605714 1723 ntBASIC17.29■□□□□ 0.36
VEGFBP49765 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.29■□□□□ 0.36
VEGFBP49765 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 AC141586.5-201ENST00000624546 2050 ntBASIC17.28■□□□□ 0.36
VEGFBP49765 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 AC018695.7-201ENST00000624587 2492 ntBASIC17.28■□□□□ 0.36
VEGFBP49765 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VEGFBP49765 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFBP49765 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
VEGFBP49765 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 RNA5SP359-201ENST00000364838 113 ntBASIC17.28■□□□□ 0.36
VEGFBP49765 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFBP49765 AL157407.1-201ENST00000435784 904 ntBASIC17.28■□□□□ 0.36
VEGFBP49765 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.28■□□□□ 0.36
VEGFBP49765 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VEGFBP49765 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 AC138701.2-201ENST00000553634 226 ntBASIC17.28■□□□□ 0.36
VEGFBP49765 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.28■□□□□ 0.36
VEGFBP49765 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFBP49765 AC087289.5-201ENST00000586076 3175 ntBASIC17.28■□□□□ 0.36
VEGFBP49765 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VEGFBP49765 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.28■□□□□ 0.36
VEGFBP49765 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VEGFBP49765 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VEGFBP49765 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.27■□□□□ 0.36
VEGFBP49765 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
VEGFBP49765 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
VEGFBP49765 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VEGFBP49765 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VEGFBP49765 RN7SKP109-201ENST00000410592 316 ntBASIC17.27■□□□□ 0.36
VEGFBP49765 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.27■□□□□ 0.36
VEGFBP49765 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.27■□□□□ 0.36
VEGFBP49765 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.27■□□□□ 0.36
VEGFBP49765 MIR6746-201ENST00000620971 63 ntBASIC17.27■□□□□ 0.36
VEGFBP49765 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.27■□□□□ 0.36
VEGFBP49765 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.27■□□□□ 0.35
VEGFBP49765 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFBP49765 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFBP49765 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.27■□□□□ 0.35
VEGFBP49765 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFBP49765 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
VEGFBP49765 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFBP49765 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VEGFBP49765 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.27■□□□□ 0.35
VEGFBP49765 AC139713.2-201ENST00000641328 2723 ntBASIC17.27■□□□□ 0.35
VEGFBP49765 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VEGFBP49765 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VEGFBP49765 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.26■□□□□ 0.35
VEGFBP49765 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VEGFBP49765 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
VEGFBP49765 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 KRT17P5-201ENST00000332088 839 ntBASIC17.26■□□□□ 0.35
VEGFBP49765 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VEGFBP49765 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.26■□□□□ 0.35
VEGFBP49765 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.26■□□□□ 0.35
VEGFBP49765 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.26■□□□□ 0.35
VEGFBP49765 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms