Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 TP53TG3HP-202ENST00000569755 579 ntBASIC15.25■□□□□ 0.03
CDH3P22223 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDH3P22223 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDH3P22223 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 AC005089.1-201ENST00000619486 2241 ntBASIC15.24■□□□□ 0.03
CDH3P22223 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 AC011477.6-201ENST00000604980 1927 ntBASIC15.24■□□□□ 0.03
CDH3P22223 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CDH3P22223 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH3P22223 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 AC005034.1-201ENST00000426657 489 ntBASIC15.24■□□□□ 0.03
CDH3P22223 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 RN7SL692P-201ENST00000464677 288 ntBASIC15.24■□□□□ 0.03
CDH3P22223 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH3P22223 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.24■□□□□ 0.03
CDH3P22223 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.24■□□□□ 0.03
CDH3P22223 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CDH3P22223 AC005225.4-201ENST00000557330 545 ntBASIC15.24■□□□□ 0.03
CDH3P22223 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 AC012645.4-201ENST00000610691 1061 ntBASIC15.24■□□□□ 0.03
CDH3P22223 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH3P22223 AC007431.3-201ENST00000623221 587 ntBASIC15.24■□□□□ 0.03
CDH3P22223 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH3P22223 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH3P22223 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDH3P22223 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH3P22223 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH3P22223 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
CDH3P22223 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH3P22223 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH3P22223 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDH3P22223 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms