Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC023310.1-201ENST00000554836 735 ntBASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AC097376.2-205ENST00000610159 5334 ntBASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 NUS1P3-201ENST00000423502 862 ntBASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 GAPDHP40-201ENST00000505218 1006 ntBASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 FAM8A2P-201ENST00000528813 1142 ntBASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 AC145423.3-201ENST00000615987 467 ntBASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDP1Q9Y5B0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AC112504.1-201ENST00000623415 1841 ntBASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms