Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AC007551.1-201ENST00000457394 519 ntBASIC16.29■□□□□ 0.2
CDH9Q9ULB4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 FTH1P14-201ENST00000482930 551 ntBASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 PDIA3P1-201ENST00000471856 1510 ntBASIC16.29■□□□□ 0.2
CDH9Q9ULB4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH9Q9ULB4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CICP11-201ENST00000434745 2827 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 SSR4P1-203ENST00000599569 2260 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 GNRHR2-203ENST00000581100 1187 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 AL008721.1-201ENST00000609964 604 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 AC145423.3-201ENST00000615987 467 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 PAUPAR-201ENST00000630360 2965 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 KRT8P14-201ENST00000414254 1442 ntBASIC16.28■□□□□ 0.2
CDH9Q9ULB4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH9Q9ULB4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC008741.2-201ENST00000612792 3115 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC136621.1-201ENST00000624017 2304 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 MIR658-201ENST00000385210 100 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 C2orf27AP3-201ENST00000434123 579 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC104989.1-201ENST00000519711 778 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms