Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 DUSP5P1-201ENST00000441325 1139 ntBASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 PHKG1P2-201ENST00000457537 863 ntBASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 ACTL9-202ENST00000612068 1252 ntBASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLIRPQ9GZT3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 KRT18P31-201ENST00000506277 1292 ntBASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 HNRNPUP1-201ENST00000554987 333 ntBASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AC074051.2-201ENST00000565115 352 ntBASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AL078644.1-201ENST00000609881 752 ntBASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AC090505.1-201ENST00000430515 1834 ntBASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLIRPQ9GZT3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLIRPQ9GZT3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms