Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC114271.1-201ENST00000612689 2813 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 AC113347.1-201ENST00000413321 391 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PRYP5-201ENST00000451909 266 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 AF228730.7-201ENST00000641842 219 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 AP001267.2-201ENST00000532619 2086 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 AC015818.8-201ENST00000587907 1519 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 NCF1C-201ENST00000438382 1427 ntBASIC12.61□□□□□ -0.39
NKX6-2Q9C056 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX6-2Q9C056 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 AC004241.5-201ENST00000623870 2448 ntBASIC12.6□□□□□ -0.39
NKX6-2Q9C056 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 CYP2A7P1-201ENST00000595391 815 ntBASIC12.6□□□□□ -0.39
NKX6-2Q9C056 Z69720.1-201ENST00000601483 472 ntBASIC12.6□□□□□ -0.39
NKX6-2Q9C056 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 MTHFR-210ENST00000641407 2387 ntBASIC12.6□□□□□ -0.39
NKX6-2Q9C056 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 AC020658.7-201ENST00000624274 2442 ntBASIC12.6□□□□□ -0.39
NKX6-2Q9C056 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NKX6-2Q9C056 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AL353732.1-201ENST00000569618 1459 ntBASIC12.59□□□□□ -0.39
NKX6-2Q9C056 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AP001972.5-201ENST00000624624 2338 ntBASIC12.59□□□□□ -0.39
NKX6-2Q9C056 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms