Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 BCRP6-201ENST00000510112 632 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 BCRP7-201ENST00000511549 544 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 HILS1-202ENST00000545329 423 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 AL354718.3-201ENST00000616414 581 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 CR382287.1-201ENST00000623954 586 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 AC087481.3-201ENST00000602886 1894 ntBASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.03■□□□□ 0.16
CDK5RAP1Q96SZ6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 ACTBP8-201ENST00000403258 1108 ntBASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 AP005482.1-201ENST00000563722 1273 ntBASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 AL603764.1-201ENST00000636452 321 ntBASIC16.02■□□□□ 0.16
CDK5RAP1Q96SZ6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 LINC02199-201ENST00000506655 2702 ntBASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDK5RAP1Q96SZ6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 AC092933.1-201ENST00000393644 945 ntBASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 KLF2P2-201ENST00000416807 1039 ntBASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 GHSR-202ENST00000427970 912 ntBASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 AC016694.1-201ENST00000434179 700 ntBASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK5RAP1Q96SZ6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms