Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 AC144831.1-201ENST00000573312 2656 ntBASIC12.85□□□□□ -0.35
GAFA1Q96PS6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GAFA1Q96PS6 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.85□□□□□ -0.35
GAFA1Q96PS6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 FLJ16779-201ENST00000612722 7638 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 SOCS2P1-201ENST00000417727 557 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 AC133539.2-201ENST00000604757 467 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 WFDC1-204ENST00000613603 549 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 KRT8P22-201ENST00000562317 1415 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 MROH4P-201ENST00000431302 1578 ntBASIC12.84□□□□□ -0.35
GAFA1Q96PS6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GAFA1Q96PS6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
GAFA1Q96PS6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.83□□□□□ -0.36
GAFA1Q96PS6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 AC091951.1-201ENST00000512854 2465 ntBASIC12.83□□□□□ -0.36
GAFA1Q96PS6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms