Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 POU5F1P2-201ENST00000521750 823 ntBASIC15.22■□□□□ 0.03
CLDN23Q96B33 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 AC103810.10-201ENST00000606504 343 ntBASIC15.22■□□□□ 0.03
CLDN23Q96B33 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN23Q96B33 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN23Q96B33 FZD10-202ENST00000539839 3282 ntBASIC15.21■□□□□ 0.03
CLDN23Q96B33 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 E2F3P2-201ENST00000447755 1422 ntBASIC15.21■□□□□ 0.03
CLDN23Q96B33 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 AL627231.1-201ENST00000394467 1125 ntBASIC15.21■□□□□ 0.03
CLDN23Q96B33 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 DNM1P30-201ENST00000563586 452 ntBASIC15.21■□□□□ 0.03
CLDN23Q96B33 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.21■□□□□ 0.03
CLDN23Q96B33 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN23Q96B33 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN23Q96B33 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN23Q96B33 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
CLDN23Q96B33 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN23Q96B33 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CLDN23Q96B33 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN23Q96B33 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 AL596087.1-201ENST00000400979 1969 ntBASIC15.2■□□□□ 0.02
CLDN23Q96B33 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 AC012441.2-201ENST00000444843 739 ntBASIC15.2■□□□□ 0.02
CLDN23Q96B33 RN7SL258P-201ENST00000478664 300 ntBASIC15.2■□□□□ 0.02
CLDN23Q96B33 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN23Q96B33 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN23Q96B33 AC132192.2-201ENST00000596206 1147 ntBASIC15.2■□□□□ 0.02
CLDN23Q96B33 AC008825.2-201ENST00000603374 718 ntBASIC15.2■□□□□ 0.02
CLDN23Q96B33 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms