Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TDH-203ENST00000531764 1110 ntBASIC17.43■□□□□ 0.38
USP11P51784 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
USP11P51784 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.43■□□□□ 0.38
USP11P51784 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP11P51784 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 AC138035.3-201ENST00000622706 2791 ntBASIC17.42■□□□□ 0.38
USP11P51784 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
USP11P51784 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.42■□□□□ 0.38
USP11P51784 AC012441.1-201ENST00000446669 685 ntBASIC17.42■□□□□ 0.38
USP11P51784 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.42■□□□□ 0.38
USP11P51784 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.42■□□□□ 0.38
USP11P51784 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
USP11P51784 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
USP11P51784 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP11P51784 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
USP11P51784 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP11P51784 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.41■□□□□ 0.38
USP11P51784 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
USP11P51784 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 AL139094.1-201ENST00000405549 1188 ntBASIC17.41■□□□□ 0.38
USP11P51784 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 AC068587.3-201ENST00000526613 355 ntBASIC17.41■□□□□ 0.38
USP11P51784 SLC25A47P1-201ENST00000531577 414 ntBASIC17.41■□□□□ 0.38
USP11P51784 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP11P51784 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms