Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 AC092384.3-202ENST00000564646 2873 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 REXO1L4P-201ENST00000605109 1937 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF9P41273 ACKR1-201ENST00000368121 1240 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF9P41273 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF9P41273 AC244107.1-201ENST00000442033 332 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFSF9P41273 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.67■□□□□ 0.26
TNFSF9P41273 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 AP005019.2-201ENST00000615104 511 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFSF9P41273 AL157414.3-201ENST00000624276 1954 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFSF9P41273 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFSF9P41273 LINC00554-201ENST00000564841 3011 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 AC091951.1-201ENST00000512854 2465 ntBASIC16.67■□□□□ 0.26
TNFSF9P41273 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TNFSF9P41273 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFSF9P41273 AC046158.3-201ENST00000624947 2558 ntBASIC16.66■□□□□ 0.26
TNFSF9P41273 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 GK-202ENST00000378941 458 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFSF9P41273 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFSF9P41273 GHSR-202ENST00000427970 912 ntBASIC16.66■□□□□ 0.26
TNFSF9P41273 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFSF9P41273 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TNFSF9P41273 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.66■□□□□ 0.26
TNFSF9P41273 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 AC106886.1-201ENST00000568660 600 ntBASIC16.66■□□□□ 0.26
TNFSF9P41273 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TNFSF9P41273 AL512343.1-201ENST00000605837 169 ntBASIC16.66■□□□□ 0.26
TNFSF9P41273 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TNFSF9P41273 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFSF9P41273 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TNFSF9P41273 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFSF9P41273 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms