Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 AC144831.1-201ENST00000573312 2656 ntBASIC14.23□□□□□ -0.13
RFC3P40938 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.23□□□□□ -0.13
RFC3P40938 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.23□□□□□ -0.13
RFC3P40938 BCRP2-202ENST00000447763 634 ntBASIC14.23□□□□□ -0.13
RFC3P40938 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.23□□□□□ -0.13
RFC3P40938 USP32P1-208ENST00000506594 1164 ntBASIC14.23□□□□□ -0.13
RFC3P40938 BCRP6-201ENST00000510112 632 ntBASIC14.23□□□□□ -0.13
RFC3P40938 BCRP7-201ENST00000511549 544 ntBASIC14.23□□□□□ -0.13
RFC3P40938 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 AC124283.3-201ENST00000570869 594 ntBASIC14.23□□□□□ -0.13
RFC3P40938 MIR4259-201ENST00000584466 101 ntBASIC14.23□□□□□ -0.13
RFC3P40938 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.23□□□□□ -0.13
RFC3P40938 AC015936.2-201ENST00000593177 259 ntBASIC14.23□□□□□ -0.13
RFC3P40938 BTNL10-201ENST00000595971 695 ntBASIC14.23□□□□□ -0.13
RFC3P40938 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RFC3P40938 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RFC3P40938 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFC3P40938 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RFC3P40938 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.23□□□□□ -0.13
RFC3P40938 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RFC3P40938 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.22□□□□□ -0.13
RFC3P40938 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.22□□□□□ -0.13
RFC3P40938 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.22□□□□□ -0.13
RFC3P40938 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.22□□□□□ -0.13
RFC3P40938 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
RFC3P40938 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.22□□□□□ -0.13
RFC3P40938 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.22□□□□□ -0.13
RFC3P40938 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.22□□□□□ -0.13
RFC3P40938 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.22□□□□□ -0.13
RFC3P40938 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RFC3P40938 SLC25A47P1-201ENST00000531577 414 ntBASIC14.22□□□□□ -0.13
RFC3P40938 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.22□□□□□ -0.13
RFC3P40938 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RFC3P40938 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.22□□□□□ -0.13
RFC3P40938 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 AC106886.1-201ENST00000568660 600 ntBASIC14.22□□□□□ -0.13
RFC3P40938 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.22□□□□□ -0.13
RFC3P40938 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.22□□□□□ -0.13
RFC3P40938 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.22□□□□□ -0.13
RFC3P40938 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms