Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm10051-201ENSMUST00000145209 414 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm25881-201ENSMUST00000157783 103 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm37246-201ENSMUST00000192665 835 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm44126-201ENSMUST00000204831 514 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm1821-202ENSMUST00000227415 750 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Grk6-205ENSMUST00000224653 2976 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3854A0A1B0GSS6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Gm3854A0A1B0GSS6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gm3854A0A1B0GSS6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gm3854A0A1B0GSS6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.43
Gm3854A0A1B0GSS6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Gm3854A0A1B0GSS6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gm3854A0A1B0GSS6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm13045-201ENSMUST00000119019 712 ntBASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3854A0A1B0GSS6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.38□□□□□ -0.43
Gm3854A0A1B0GSS6 Gm23251-201ENSMUST00000103773 110 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms