Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 KLF2P1-201ENST00000447438 1042 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 AC138466.3-201ENST00000619983 221 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 MIR6816-201ENST00000620368 66 ntBASIC12.72□□□□□ -0.37
CSMD2Q7Z408 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD2Q7Z408 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 MIR566-201ENST00000385187 94 ntBASIC12.71□□□□□ -0.37
CSMD2Q7Z408 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.71□□□□□ -0.37
CSMD2Q7Z408 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD2Q7Z408 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 HIST2H2BA-201ENST00000412169 381 ntBASIC12.71□□□□□ -0.38
CSMD2Q7Z408 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 SERBP1P2-201ENST00000436888 1164 ntBASIC12.71□□□□□ -0.38
CSMD2Q7Z408 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 DUX4L46-201ENST00000566845 751 ntBASIC12.71□□□□□ -0.38
CSMD2Q7Z408 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 PTPN20CP-201ENST00000614090 920 ntBASIC12.71□□□□□ -0.38
CSMD2Q7Z408 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
CSMD2Q7Z408 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AL008718.2-201ENST00000609206 1313 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AL645937.2-201ENST00000396808 931 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AP000911.2-201ENST00000534330 502 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 LINC00431-202ENST00000636375 159 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC244394.1-201ENST00000435000 1665 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 RN7SKP175-201ENST00000408472 289 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms