Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14□□□□□ -0.17
CDK5Q00535 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
CDK5Q00535 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14□□□□□ -0.17
CDK5Q00535 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDK5Q00535 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDK5Q00535 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CDK5Q00535 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDK5Q00535 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14□□□□□ -0.17
CDK5Q00535 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14□□□□□ -0.17
CDK5Q00535 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14□□□□□ -0.17
CDK5Q00535 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDK5Q00535 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDK5Q00535 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDK5Q00535 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDK5Q00535 AC041040.2-201ENST00000622926 2899 ntBASIC14□□□□□ -0.17
CDK5Q00535 AC097359.2-201ENST00000604992 2389 ntBASIC14□□□□□ -0.17
CDK5Q00535 REXO1L4P-201ENST00000605109 1937 ntBASIC14□□□□□ -0.17
CDK5Q00535 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDK5Q00535 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 KRT8P12-202ENST00000472924 1397 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC027601.5-201ENST00000624065 2482 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 CICP4-201ENST00000447359 2812 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC023274.1-201ENST00000418278 595 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 AL590627.1-203ENST00000421194 1026 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 MCCD1P2-201ENST00000423228 335 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 TPM4P1-201ENST00000436100 807 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.99□□□□□ -0.17
CDK5Q00535 AL133215.2-201ENST00000609242 977 ntBASIC13.99□□□□□ -0.17
CDK5Q00535 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.99□□□□□ -0.17
CDK5Q00535 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.99□□□□□ -0.17
CDK5Q00535 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDK5Q00535 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDK5Q00535 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
CDK5Q00535 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.98□□□□□ -0.17
CDK5Q00535 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CDK5Q00535 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.98□□□□□ -0.17
CDK5Q00535 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDK5Q00535 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms