Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LBX1P52954 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LBX1P52954 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LBX1P52954 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LBX1P52954 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LBX1P52954 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LBX1P52954 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.04■□□□□ 0.32
LBX1P52954 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.04■□□□□ 0.32
LBX1P52954 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LBX1P52954 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.04■□□□□ 0.32
LBX1P52954 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.04■□□□□ 0.32
LBX1P52954 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.04■□□□□ 0.32
LBX1P52954 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC17.04■□□□□ 0.32
LBX1P52954 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.04■□□□□ 0.32
LBX1P52954 AC142086.5-202ENST00000562500 217 ntBASIC17.04■□□□□ 0.32
LBX1P52954 RN7SL357P-201ENST00000581065 298 ntBASIC17.04■□□□□ 0.32
LBX1P52954 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.04■□□□□ 0.32
LBX1P52954 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LBX1P52954 PSME2-217ENST00000615264 874 ntTSL 5 BASIC17.04■□□□□ 0.32
LBX1P52954 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 PSME2-218ENST00000630027 185 ntTSL 3 BASIC17.04■□□□□ 0.32
LBX1P52954 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LBX1P52954 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LBX1P52954 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.04■□□□□ 0.32
LBX1P52954 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.04■□□□□ 0.32
LBX1P52954 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
LBX1P52954 MARK2P16-201ENST00000605714 1723 ntBASIC17.04■□□□□ 0.32
LBX1P52954 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LBX1P52954 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LBX1P52954 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.03■□□□□ 0.32
LBX1P52954 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LBX1P52954 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.03■□□□□ 0.32
LBX1P52954 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.03■□□□□ 0.32
LBX1P52954 AC026434.2-201ENST00000506094 1078 ntBASIC17.03■□□□□ 0.32
LBX1P52954 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.03■□□□□ 0.32
LBX1P52954 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.03■□□□□ 0.32
LBX1P52954 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.03■□□□□ 0.32
LBX1P52954 CTBP2P6-201ENST00000526402 1229 ntBASIC17.03■□□□□ 0.32
LBX1P52954 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 AC226150.1-201ENST00000544259 466 ntBASIC17.03■□□□□ 0.32
LBX1P52954 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 AC068831.5-201ENST00000557387 328 ntBASIC17.03■□□□□ 0.32
LBX1P52954 AC140113.1-201ENST00000603467 169 ntBASIC17.03■□□□□ 0.32
LBX1P52954 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
LBX1P52954 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 AC006058.4-201ENST00000624016 1670 ntBASIC17.03■□□□□ 0.32
LBX1P52954 AC020910.5-201ENST00000623668 1865 ntBASIC17.03■□□□□ 0.32
LBX1P52954 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.03■□□□□ 0.32
LBX1P52954 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LBX1P52954 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.02■□□□□ 0.32
LBX1P52954 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 DKKL1P1-201ENST00000400550 698 ntBASIC17.02■□□□□ 0.32
LBX1P52954 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LBX1P52954 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms