Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 AC097724.1-201ENST00000609581 426 ntBASIC20.17■□□□□ 0.82
NBPF4Q96M43 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 AL603764.1-201ENST00000636452 321 ntBASIC20.17■□□□□ 0.82
NBPF4Q96M43 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF4Q96M43 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.17■□□□□ 0.82
NBPF4Q96M43 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 SPTLC1P5-201ENST00000450718 252 ntBASIC20.16■□□□□ 0.82
NBPF4Q96M43 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 MIR4783-201ENST00000580343 82 ntBASIC20.16■□□□□ 0.82
NBPF4Q96M43 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NBPF4Q96M43 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NBPF4Q96M43 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 UPF3AP2-201ENST00000457924 1132 ntBASIC20.15■□□□□ 0.82
NBPF4Q96M43 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.15■□□□□ 0.82
NBPF4Q96M43 FTLP10-202ENST00000505798 471 ntBASIC20.15■□□□□ 0.82
NBPF4Q96M43 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 MIR4683-201ENST00000579659 81 ntBASIC20.15■□□□□ 0.82
NBPF4Q96M43 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.15■□□□□ 0.82
NBPF4Q96M43 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NBPF4Q96M43 PCDHB19P-201ENST00000570871 2371 ntBASIC20.15■□□□□ 0.82
NBPF4Q96M43 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NBPF4Q96M43 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
NBPF4Q96M43 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NBPF4Q96M43 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
NBPF4Q96M43 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NBPF4Q96M43 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NBPF4Q96M43 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NBPF4Q96M43 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NBPF4Q96M43 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NBPF4Q96M43 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.14■□□□□ 0.81
NBPF4Q96M43 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms