Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 AP001889.1-201ENST00000525414 633 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 SLC25A47P1-201ENST00000531577 414 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 BTNL10-201ENST00000595971 695 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 AC233724.13-201ENST00000598383 410 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 AL162274.1-201ENST00000617191 1098 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 AC022532.1-201ENST00000624563 1728 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.45■□□□□ 0.06
ECHDC3Q96DC8 PPT1-215ENST00000641471 2368 ntBASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AL158070.2-201ENST00000623713 1621 ntBASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AC005229.1-201ENST00000392885 409 ntBASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AC079776.1-201ENST00000401540 1152 ntBASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ECHDC3Q96DC8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 AC114812.1-204ENST00000449669 728 ntBASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms