Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.12■□□□□ 0.17
CCDC25Q86WR0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 RARRES2P8-201ENST00000566335 367 ntBASIC16.12■□□□□ 0.17
CCDC25Q86WR0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC25Q86WR0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 KRT18P2-201ENST00000447938 1258 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AC074386.1-202ENST00000463561 864 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AP002472.1-201ENST00000577490 586 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AC099522.2-201ENST00000607001 744 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 LINC01230-201ENST00000625222 3017 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 AC126335.2-201ENST00000623362 4637 ntBASIC16.11■□□□□ 0.17
CCDC25Q86WR0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CCDC25Q86WR0 CICP14-201ENST00000629111 2732 ntBASIC16.1■□□□□ 0.17
CCDC25Q86WR0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 RNA5SP419-201ENST00000515908 135 ntBASIC16.1■□□□□ 0.17
CCDC25Q86WR0 AC112191.1-201ENST00000523689 701 ntBASIC16.1■□□□□ 0.17
CCDC25Q86WR0 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC25Q86WR0 AC027307.2-201ENST00000591252 911 ntBASIC16.1■□□□□ 0.17
CCDC25Q86WR0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms