Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 PIN1P1-201ENST00000412108 996 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC023310.3-201ENST00000557027 670 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC100756.1-201ENST00000562736 682 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC138749.3-201ENST00000567691 622 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC015910.1-201ENST00000579400 975 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AL132655.2-201ENST00000596276 594 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC116165.1-201ENST00000611806 668 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC004790.1-201ENST00000612686 536 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AL158212.4-201ENST00000624062 1286 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AL121723.1-201ENST00000445194 1519 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 AL009178.2-201ENST00000597278 2719 ntBASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LDLRAP1Q5SW96 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SNX18-202ENST00000343017 3140 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SLC7A15P-201ENST00000424028 1363 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC087499.6-201ENST00000411576 835 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AL353779.1-201ENST00000434793 351 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC036164.1-201ENST00000570544 333 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 MIR3197-201ENST00000582241 73 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC099568.2-201ENST00000609194 695 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AL391069.4-201ENST00000609583 481 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 AC007541.1-201ENST00000570282 1469 ntBASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LDLRAP1Q5SW96 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LDLRAP1Q5SW96 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LDLRAP1Q5SW96 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms