Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MST1L-201ENST00000442552 2185 ntBASIC15.68■□□□□ 0.1
PRAMEF11O60813 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MROH4P-201ENST00000431302 1578 ntBASIC15.68■□□□□ 0.1
PRAMEF11O60813 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.68■□□□□ 0.1
PRAMEF11O60813 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF11O60813 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
PRAMEF11O60813 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 COX5BP8-201ENST00000416911 349 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 AC011495.1-201ENST00000498085 584 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 AP001582.1-201ENST00000525856 295 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 AC005225.4-201ENST00000557330 545 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 CLUHP6-201ENST00000580789 941 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 RPSAP52-203ENST00000622976 1023 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 BX539320.1-201ENST00000623759 877 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF11O60813 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 CU639417.3-201ENST00000624240 1404 ntBASIC15.67■□□□□ 0.1
PRAMEF11O60813 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF11O60813 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PRAMEF11O60813 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF11O60813 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms