Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 SCW4YGR279C 1161 nt4.49□□□□□ -1.69
HRD1Q08109 YLL059CYLL059C 507 nt4.49□□□□□ -1.69
HRD1Q08109 SHP1YBL058W 1272 nt4.49□□□□□ -1.69
HRD1Q08109 RPS19BYNL302C 435 nt4.49□□□□□ -1.69
HRD1Q08109 PAP1YKR002W 1707 nt4.49□□□□□ -1.69
HRD1Q08109 GAS3YMR215W 1575 nt4.48□□□□□ -1.69
HRD1Q08109 YGR125WYGR125W 3111 nt4.48□□□□□ -1.69
HRD1Q08109 RML2YEL050C 1182 nt4.48□□□□□ -1.69
HRD1Q08109 HSX1tR(CCU)J 72 nt4.48□□□□□ -1.69
HRD1Q08109 PMA1YGL008C 2757 nt4.48□□□□□ -1.69
HRD1Q08109 RPT1YKL145W 1404 nt4.47□□□□□ -1.69
HRD1Q08109 CBP4YGR174C 513 nt4.47□□□□□ -1.69
HRD1Q08109 LEM3YNL323W 1245 nt4.47□□□□□ -1.69
HRD1Q08109 RAD16YBR114W 2373 nt4.47□□□□□ -1.69
HRD1Q08109 SSY5YJL156C 2100 nt4.46□□□□□ -1.69
HRD1Q08109 DOA1YKL213C 2148 nt4.46□□□□□ -1.69
HRD1Q08109 STP4YDL048C 1473 nt4.46□□□□□ -1.7
HRD1Q08109 ULA1YPL003W 1389 nt4.46□□□□□ -1.7
HRD1Q08109 MND2YIR025W 1107 nt4.46□□□□□ -1.7
HRD1Q08109 MTW1YAL034W-A 870 nt4.46□□□□□ -1.7
HRD1Q08109 KIP2YPL155C 2121 nt4.46□□□□□ -1.7
HRD1Q08109 HOF1YMR032W 2010 nt4.46□□□□□ -1.7
HRD1Q08109 TPS3YMR261C 3165 nt4.46□□□□□ -1.7
HRD1Q08109 ARB1YER036C 1833 nt4.46□□□□□ -1.7
HRD1Q08109 YHR045WYHR045W 1683 nt4.45□□□□□ -1.7
HRD1Q08109 QDR1YIL120W 1692 nt4.45□□□□□ -1.7
HRD1Q08109 VHS1YDR247W 1386 nt4.45□□□□□ -1.7
HRD1Q08109 YCR097W-AYCR097W-A 267 nt4.45□□□□□ -1.7
HRD1Q08109 YML131WYML131W 1098 nt4.45□□□□□ -1.7
HRD1Q08109 UIP4YPL186C 915 nt4.45□□□□□ -1.7
HRD1Q08109 QRI1YDL103C 1434 nt4.45□□□□□ -1.7
HRD1Q08109 VHC1YBR235W 3363 nt4.45□□□□□ -1.7
HRD1Q08109 YMD8YML038C 1329 nt4.45□□□□□ -1.7
HRD1Q08109 NGR1YBR212W 2019 nt4.45□□□□□ -1.7
HRD1Q08109 HPC2YBR215W 1878 nt4.44□□□□□ -1.7
HRD1Q08109 YDL034WYDL034W 345 nt4.44□□□□□ -1.7
HRD1Q08109 TFS1YLR178C 660 nt4.44□□□□□ -1.7
HRD1Q08109 YNR075C-AYNR075C-A 93 nt4.44□□□□□ -1.7
HRD1Q08109 ARR3YPR201W 1215 nt4.44□□□□□ -1.7
HRD1Q08109 MET8YBR213W 825 nt4.44□□□□□ -1.7
HRD1Q08109 STE50YCL032W 1041 nt4.44□□□□□ -1.7
HRD1Q08109 YDR261C-DYDR261C-D 4815 nt4.43□□□□□ -1.7
HRD1Q08109 GIR2YDR152W 798 nt4.43□□□□□ -1.7
HRD1Q08109 YER187WYER187W 426 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)CtN(GUU)C 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)FtN(GUU)F 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)GtN(GUU)G 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)KtN(GUU)K 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)LtN(GUU)L 74 nt4.43□□□□□ -1.7
HRD1Q08109 YGR022CYGR022C 330 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)N1tN(GUU)N1 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)N2tN(GUU)N2 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)O1tN(GUU)O1 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)O2tN(GUU)O2 74 nt4.43□□□□□ -1.7
HRD1Q08109 tN(GUU)PtN(GUU)P 74 nt4.43□□□□□ -1.7
HRD1Q08109 SFK1YKL051W 1062 nt4.43□□□□□ -1.7
HRD1Q08109 YMR135W-AYMR135W-A 534 nt4.43□□□□□ -1.7
HRD1Q08109 MRPL22YNL177C 930 nt4.43□□□□□ -1.7
HRD1Q08109 MRPL36YBR122C 534 nt4.43□□□□□ -1.7
HRD1Q08109 GAL4YPL248C 2646 nt4.42□□□□□ -1.7
HRD1Q08109 NOT3YIL038C 2511 nt4.42□□□□□ -1.7
HRD1Q08109 CAD1YDR423C 1230 nt4.42□□□□□ -1.7
HRD1Q08109 YGR016WYGR016W 573 nt4.42□□□□□ -1.7
HRD1Q08109 LST8YNL006W 912 nt4.42□□□□□ -1.7
HRD1Q08109 RPA49YNL248C 1248 nt4.42□□□□□ -1.7
HRD1Q08109 HES1YOR237W 1305 nt4.42□□□□□ -1.7
HRD1Q08109 MBP1YDL056W 2502 nt4.41□□□□□ -1.7
HRD1Q08109 YHR212W-AYHR212W-A 204 nt4.41□□□□□ -1.7
HRD1Q08109 YAR061WYAR061W 204 nt4.41□□□□□ -1.7
HRD1Q08109 ROX3YBL093C 663 nt4.41□□□□□ -1.7
HRD1Q08109 SCO1YBR037C 888 nt4.41□□□□□ -1.7
HRD1Q08109 MSE1YOL033W 1611 nt4.41□□□□□ -1.7
HRD1Q08109 PDI1YCL043C 1569 nt4.4□□□□□ -1.7
HRD1Q08109 MPP10YJR002W 1782 nt4.4□□□□□ -1.7
HRD1Q08109 UGA1YGR019W 1416 nt4.4□□□□□ -1.7
HRD1Q08109 TGS1YPL157W 948 nt4.4□□□□□ -1.71
HRD1Q08109 YBR230W-AYBR230W-A 201 nt4.4□□□□□ -1.71
HRD1Q08109 MOT2YER068W 1764 nt4.4□□□□□ -1.71
HRD1Q08109 YFL034WYFL034W 3222 nt4.39□□□□□ -1.71
HRD1Q08109 JJJ3YJR097W 519 nt4.39□□□□□ -1.71
HRD1Q08109 COS9YKL219W 1224 nt4.39□□□□□ -1.71
HRD1Q08109 SEN34YAR008W 828 nt4.39□□□□□ -1.71
HRD1Q08109 CTR3YLR411W 726 nt4.39□□□□□ -1.71
HRD1Q08109 DAL82YNL314W 768 nt4.39□□□□□ -1.71
HRD1Q08109 YOL097W-AYOL097W-A 186 nt4.39□□□□□ -1.71
HRD1Q08109 YOR024WYOR024W 324 nt4.39□□□□□ -1.71
HRD1Q08109 CBC2YPL178W 627 nt4.39□□□□□ -1.71
HRD1Q08109 CLF1YLR117C 2064 nt4.39□□□□□ -1.71
HRD1Q08109 TDA7YNL176C 1911 nt4.38□□□□□ -1.71
HRD1Q08109 TOS4YLR183C 1470 nt4.38□□□□□ -1.71
HRD1Q08109 RPS16BYDL083C 432 nt4.38□□□□□ -1.71
HRD1Q08109 YDL119CYDL119C 924 nt4.38□□□□□ -1.71
HRD1Q08109 YJL107CYJL107C 1164 nt4.38□□□□□ -1.71
HRD1Q08109 FMP33YJL161W 543 nt4.38□□□□□ -1.71
HRD1Q08109 YPL102CYPL102C 303 nt4.38□□□□□ -1.71
HRD1Q08109 AIM17YHL021C 1398 nt4.38□□□□□ -1.71
HRD1Q08109 RAT1YOR048C 3021 nt4.38□□□□□ -1.71
HRD1Q08109 DAK1YML070W 1755 nt4.37□□□□□ -1.71
HRD1Q08109 PUS1YPL212C 1635 nt4.37□□□□□ -1.71
HRD1Q08109 SUR2YDR297W 1050 nt4.37□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 34.1 ms