Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC007064.4-201ENST00000637740 555 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AF228730.6-201ENST00000641497 218 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC084121.3-201ENST00000641716 218 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC105233.6-201ENST00000642093 218 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 AC006504.5-208ENST00000588784 2401 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 REXO1L1P-202ENST00000608646 1974 ntBASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCM2LQ9NUG4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC243562.2-201ENST00000561247 970 ntBASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC023141.13-201ENST00000604991 943 ntBASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 LINC00628-201ENST00000628516 1289 ntBASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 AC063926.2-201ENST00000623766 1308 ntBASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCM2LQ9NUG4 BNIP3P1-202ENST00000550043 1585 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AL691432.1-201ENST00000596308 1422 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC015922.1-201ENST00000421102 1152 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 RHOQP3-201ENST00000437982 621 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 RNA5SP421-201ENST00000516864 134 ntBASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCM2LQ9NUG4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms