Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
USB1Q9BQ65 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 ME2P1-201ENST00000426028 1970 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 RN7SKP199-201ENST00000410325 305 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 AC114501.2-201ENST00000439631 535 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 AC010336.2-201ENST00000564226 506 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 AC009407.1-201ENST00000568958 598 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 AL691432.1-201ENST00000596308 1422 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USB1Q9BQ65 CYP4F24P-201ENST00000586049 1580 ntBASIC14.05□□□□□ -0.16
USB1Q9BQ65 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.05□□□□□ -0.16
USB1Q9BQ65 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ALOX12P2-203ENST00000570921 1945 ntBASIC14.04□□□□□ -0.16
USB1Q9BQ65 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 EEF1DP4-201ENST00000446006 880 ntBASIC14.04□□□□□ -0.16
USB1Q9BQ65 UGT1A2P-201ENST00000454886 866 ntBASIC14.04□□□□□ -0.16
USB1Q9BQ65 AC093004.1-201ENST00000508850 424 ntBASIC14.04□□□□□ -0.16
USB1Q9BQ65 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 AC135586.1-201ENST00000539323 574 ntBASIC14.04□□□□□ -0.16
USB1Q9BQ65 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms