Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
RPRD1AQ96P16 SOCS2P1-201ENST00000417727 557 ntBASIC16■□□□□ 0.15
RPRD1AQ96P16 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 KRT17P7-201ENST00000451704 1104 ntBASIC16■□□□□ 0.15
RPRD1AQ96P16 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 INE1-201ENST00000456273 945 ntBASIC16■□□□□ 0.15
RPRD1AQ96P16 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16■□□□□ 0.15
RPRD1AQ96P16 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 DRD5P1-201ENST00000456605 1438 ntBASIC16■□□□□ 0.15
RPRD1AQ96P16 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC026410.3-201ENST00000514280 936 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC107373.2-201ENST00000607735 490 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 CU634019.7-201ENST00000624153 1185 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AL035252.4-201ENST00000624174 288 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 FP236241.2-201ENST00000624906 1185 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 KRT8P22-201ENST00000562317 1415 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.99■□□□□ 0.15
RPRD1AQ96P16 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RPRD1AQ96P16 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RPRD1AQ96P16 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms