Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC090164.2-201ENST00000611487 516 ntBASIC18.57■□□□□ 0.56
SNED1Q8TER0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 VDAC1P1-201ENST00000439229 848 ntBASIC18.56■□□□□ 0.56
SNED1Q8TER0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 TUBB8P8-201ENST00000458717 1058 ntBASIC18.56■□□□□ 0.56
SNED1Q8TER0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 AC019193.1-201ENST00000506678 823 ntBASIC18.56■□□□□ 0.56
SNED1Q8TER0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNED1Q8TER0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.56■□□□□ 0.56
SNED1Q8TER0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 AC009093.2-202ENST00000620513 2079 ntBASIC18.55■□□□□ 0.56
SNED1Q8TER0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 AL627389.1-201ENST00000413508 1182 ntBASIC18.55■□□□□ 0.56
SNED1Q8TER0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SNED1Q8TER0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNED1Q8TER0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.54■□□□□ 0.56
SNED1Q8TER0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 AC021723.1-201ENST00000486306 515 ntBASIC18.54■□□□□ 0.56
SNED1Q8TER0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNED1Q8TER0 SNORD3B-2-202ENST00000571722 791 ntBASIC18.54■□□□□ 0.56
SNED1Q8TER0 AC006453.1-201ENST00000636037 1257 ntBASIC18.54■□□□□ 0.56
SNED1Q8TER0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNED1Q8TER0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms